STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_016674Spatacsin_C domain-containing protein. (2420 aa)    
Predicted Functional Partners:
DCAR_006255
Uncharacterized protein.
  
 
 0.650
DCAR_000729
PH domain-containing protein.
  
  
 0.646
DCAR_006256
Uncharacterized protein.
  
 
 0.637
DCAR_006803
AB hydrolase-1 domain-containing protein.
      
 0.539
DCAR_006254
Uncharacterized protein.
   
 
 0.515
DCAR_006257
Uncharacterized protein.
   
 
 0.515
DCAR_022536
Uncharacterized protein.
    
 
 0.510
DCAR_011292
WD_REPEATS_REGION domain-containing protein.
  
    0.472
DCAR_030591
Uncharacterized protein.
  
     0.470
DCAR_021199
SET domain-containing protein.
  
    0.466
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.