STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_018781ABC transporter domain-containing protein. (309 aa)    
Predicted Functional Partners:
DCAR_018782
ABC transporter domain-containing protein.
 
    
0.917
DCAR_021248
Uncharacterized protein.
   
 
 0.861
DCAR_023951
Ribosomal_L18_c domain-containing protein.
  
 
 0.854
DCAR_024228
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.852
DCAR_022467
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
   
   0.840
DCAR_003856
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.754
rpl20
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.754
DCAR_022974
Uncharacterized protein.
  
 
 0.737
DCAR_015103
Uncharacterized protein.
  
 
 0.737
DCAR_001704
Uncharacterized protein.
   
 
 0.728
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.