Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCAR_009632 | DCAR_024971 | A0A166A8G9 | A0A161ZNI2 | Pyr_redox_2 domain-containing protein. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.942 |
DCAR_009632 | DCAR_026140 | A0A166A8G9 | A0A164ULZ6 | Pyr_redox_2 domain-containing protein. | Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.587 |
DCAR_009632 | DCAR_029058 | A0A166A8G9 | A0A175YDA6 | Pyr_redox_2 domain-containing protein. | Uncharacterized protein. | 0.919 |
DCAR_011194 | DCAR_012618 | A0A166B725 | A0A169WGK0 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Uncharacterized protein. | 0.478 |
DCAR_011194 | DCAR_018535 | A0A166B725 | A0A164Z413 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Uncharacterized protein. | 0.476 |
DCAR_011194 | DCAR_024971 | A0A166B725 | A0A161ZNI2 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.904 |
DCAR_011194 | DCAR_030627 | A0A166B725 | A0A175YIT0 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Uncharacterized protein. | 0.651 |
DCAR_012618 | DCAR_011194 | A0A169WGK0 | A0A166B725 | Uncharacterized protein. | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.478 |
DCAR_012618 | DCAR_016660 | A0A169WGK0 | A0A164XNY4 | Uncharacterized protein. | Uncharacterized protein. | 0.690 |
DCAR_012618 | DCAR_018535 | A0A169WGK0 | A0A164Z413 | Uncharacterized protein. | Uncharacterized protein. | 0.901 |
DCAR_012618 | DCAR_023061 | A0A169WGK0 | A0A164UZ41 | Uncharacterized protein. | Uncharacterized protein. | 0.982 |
DCAR_012618 | DCAR_024971 | A0A169WGK0 | A0A161ZNI2 | Uncharacterized protein. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.785 |
DCAR_012618 | DCAR_030627 | A0A169WGK0 | A0A175YIT0 | Uncharacterized protein. | Uncharacterized protein. | 0.998 |
DCAR_012618 | psaJ | A0A169WGK0 | A0A175YEH9 | Uncharacterized protein. | Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. | 0.957 |
DCAR_016660 | DCAR_012618 | A0A164XNY4 | A0A169WGK0 | Uncharacterized protein. | Uncharacterized protein. | 0.690 |
DCAR_016660 | DCAR_018535 | A0A164XNY4 | A0A164Z413 | Uncharacterized protein. | Uncharacterized protein. | 0.689 |
DCAR_016660 | DCAR_023061 | A0A164XNY4 | A0A164UZ41 | Uncharacterized protein. | Uncharacterized protein. | 0.934 |
DCAR_016660 | DCAR_024971 | A0A164XNY4 | A0A161ZNI2 | Uncharacterized protein. | 2Fe-2S ferredoxin-type domain-containing protein. | 0.763 |
DCAR_016660 | DCAR_030627 | A0A164XNY4 | A0A175YIT0 | Uncharacterized protein. | Uncharacterized protein. | 0.949 |
DCAR_016660 | psaJ | A0A164XNY4 | A0A175YEH9 | Uncharacterized protein. | Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. | 0.940 |
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