STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_026207Uncharacterized protein. (536 aa)    
Predicted Functional Partners:
DCAR_010395
Uncharacterized protein.
     
 0.558
DCAR_000973
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.529
DCAR_020940
Uncharacterized protein.
  
  
 0.487
DCAR_009061
Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
      
 0.483
DCAR_031096
Uncharacterized protein.
      
 0.456
DCAR_029357
Usp domain-containing protein.
     
 0.411
DCAR_015016
C2 NT-type domain-containing protein.
     
 0.407
GGR-1
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.404
DCAR_018595
Ubiquitin carboxyl-terminal hydrolase.
 
  
  0.403
DCAR_005832
Uncharacterized protein.
    
  0.401
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.