STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_025195Uncharacterized protein. (297 aa)    
Predicted Functional Partners:
DCAR_013878
Uncharacterized protein.
  
     0.511
DCAR_002817
Uncharacterized protein.
      
 0.489
DCAR_028009
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
  
 0.474
DCAR_007021
F-box domain-containing protein.
  
    0.464
DCAR_016728
Uncharacterized protein.
  
     0.436
DCAR_014608
TPX2_importin domain-containing protein.
  
     0.433
DCAR_013879
Uncharacterized protein.
  
     0.432
DCAR_006876
Uncharacterized protein.
  
     0.431
DCAR_003554
Uncharacterized protein.
  
     0.430
DCAR_023172
Uncharacterized protein.
  
     0.424
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.