Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_019222Uncharacterized protein. (662 aa)    
Predicted Functional Partners:
DCAR_027686
Uncharacterized protein.
   
 
 0.790
DCAR_024042
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.778
DCAR_005380
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
   0.755
DCAR_006603
DUF667 domain-containing protein.
    
   0.755
DCAR_023293
Dynein light chain.
    
 
 0.723
DCAR_002475
Dynein light chain.
    
 
 0.723
DCAR_010897
Uncharacterized protein.
    
 
 0.714
DCAR_025730
Uncharacterized protein.
    
 
 0.714
DCAR_006649
Uncharacterized protein.
    
 0.714
DCAR_026420
NDK domain-containing protein; Belongs to the NDK family.
    
   0.705
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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