Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_013448Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (269 aa)    
Predicted Functional Partners:
DCAR_019610
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 0.973
DCAR_023951
Ribosomal_L18_c domain-containing protein.
  
 0.970
DCAR_029704
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.970
DCAR_012725
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
  
 0.968
DCAR_025940
Ribosomal_L6 domain-containing protein; Belongs to the universal ribosomal protein uL6 family.
  
 0.966
DCAR_008951
RIBOSOMAL_L9 domain-containing protein.
  
 
 0.966
DCAR_021248
Uncharacterized protein.
  
 
 0.965
rps14
Ribosomal protein S14.
  
 
 0.965
DCAR_009692
Uncharacterized protein.
   
 0.964
rpl16
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
  
 0.964
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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