STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_009177Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
DCAR_023402
Lipase_GDSL domain-containing protein; Belongs to the 'GDSL' lipolytic enzyme family.
  
  
 0.667
DCAR_027058
Uncharacterized protein.
     
 0.565
DCAR_006644
Uncharacterized protein.
     
 0.563
DCAR_026806
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.560
DCAR_024553
RING-type domain-containing protein.
      
 0.556
DCAR_017444
Lon N-terminal domain-containing protein.
      
 0.555
DCAR_018515
Uncharacterized protein.
      
 0.555
DCAR_021068
Uncharacterized protein.
      
 0.554
DCAR_018638
Uncharacterized protein.
    
  0.487
DCAR_010680
FA_FANCE domain-containing protein.
      
 0.480
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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