Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCAR_002979 | DCAR_008733 | A0A162B5N5 | A0A165ZFN0 | Uncharacterized protein. | RRM domain-containing protein. | 0.554 |
DCAR_002979 | DCAR_009362 | A0A162B5N5 | A0A166A0C8 | Uncharacterized protein. | Uncharacterized protein. | 0.442 |
DCAR_002979 | DCAR_010157 | A0A162B5N5 | A0A162AI52 | Uncharacterized protein. | RRM domain-containing protein. | 0.587 |
DCAR_003088 | DCAR_004294 | A0A166HV79 | A0A166IYU7 | RRM domain-containing protein. | Uncharacterized protein. | 0.630 |
DCAR_003088 | DCAR_004894 | A0A166HV79 | A0A161Y469 | RRM domain-containing protein. | RRM domain-containing protein. | 0.650 |
DCAR_003088 | DCAR_007018 | A0A166HV79 | A0A166E727 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.644 |
DCAR_003088 | DCAR_007593 | A0A166HV79 | A0A166EMA1 | RRM domain-containing protein. | Uncharacterized protein. | 0.490 |
DCAR_003088 | DCAR_008733 | A0A166HV79 | A0A165ZFN0 | RRM domain-containing protein. | RRM domain-containing protein. | 0.838 |
DCAR_003088 | DCAR_010157 | A0A166HV79 | A0A162AI52 | RRM domain-containing protein. | RRM domain-containing protein. | 0.640 |
DCAR_003088 | DCAR_012430 | A0A166HV79 | A0A166CEP4 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.644 |
DCAR_004294 | DCAR_003088 | A0A166IYU7 | A0A166HV79 | Uncharacterized protein. | RRM domain-containing protein. | 0.630 |
DCAR_004294 | DCAR_004894 | A0A166IYU7 | A0A161Y469 | Uncharacterized protein. | RRM domain-containing protein. | 0.536 |
DCAR_004294 | DCAR_008733 | A0A166IYU7 | A0A165ZFN0 | Uncharacterized protein. | RRM domain-containing protein. | 0.452 |
DCAR_004294 | DCAR_009362 | A0A166IYU7 | A0A166A0C8 | Uncharacterized protein. | Uncharacterized protein. | 0.511 |
DCAR_004294 | DCAR_010157 | A0A166IYU7 | A0A162AI52 | Uncharacterized protein. | RRM domain-containing protein. | 0.540 |
DCAR_004894 | DCAR_003088 | A0A161Y469 | A0A166HV79 | RRM domain-containing protein. | RRM domain-containing protein. | 0.650 |
DCAR_004894 | DCAR_004294 | A0A161Y469 | A0A166IYU7 | RRM domain-containing protein. | Uncharacterized protein. | 0.536 |
DCAR_004894 | DCAR_007383 | A0A161Y469 | A0A166EGU2 | RRM domain-containing protein. | Uncharacterized protein. | 0.467 |
DCAR_004894 | DCAR_007593 | A0A161Y469 | A0A166EMA1 | RRM domain-containing protein. | Uncharacterized protein. | 0.487 |
DCAR_004894 | DCAR_008733 | A0A161Y469 | A0A165ZFN0 | RRM domain-containing protein. | RRM domain-containing protein. | 0.555 |
page 1 of 3