Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_001349TPR_REGION domain-containing protein. (1422 aa)    
Predicted Functional Partners:
DCAR_023758
Uncharacterized protein.
  
 
 0.910
DCAR_002044
Uncharacterized protein.
  
 
 0.908
DCAR_029941
Uncharacterized protein.
  
 
 0.906
DCAR_013049
Uncharacterized protein.
    
 0.903
DCAR_006574
Uncharacterized protein.
    
 0.886
DCAR_025246
Histone domain-containing protein.
    
 0.886
DCAR_021940
Histone domain-containing protein.
    
 0.886
DCAR_016618
Uncharacterized protein.
    
 0.886
DCAR_014205
Uncharacterized protein.
    
 0.886
DCAR_006578
Histone H3; Belongs to the histone H3 family.
    
 0.886
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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