STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_023812Uncharacterized protein. (354 aa)    
Predicted Functional Partners:
DCAR_018918
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.505
DCAR_015630
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.503
DCAR_022951
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.500
DCAR_018919
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.499
DCAR_021025
Uncharacterized protein.
  
     0.497
DCAR_020199
PMEI domain-containing protein.
  
     0.497
DCAR_013856
Uncharacterized protein.
  
     0.490
DCAR_009933
Uncharacterized protein.
  
     0.480
DCAR_003979
DUF641 domain-containing protein.
  
     0.479
DCAR_011878
ANK_REP_REGION domain-containing protein.
  
 
  0.468
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.