STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_025652Mg-por_mtran_C domain-containing protein. (318 aa)    
Predicted Functional Partners:
DCAR_013602
DUF3479 domain-containing protein.
 
 
 0.992
DCAR_004025
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
 
 
 0.987
DCAR_016944
Rubrerythrin domain-containing protein.
  
 
 0.966
DCAR_013513
Rubrerythrin domain-containing protein.
  
 
 0.966
DCAR_002090
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the GRAS family.
  
  
  0.926
DCAR_015394
Uncharacterized protein.
 
  
 0.813
DCAR_026055
Uncharacterized protein.
 
  
 0.800
DCAR_019333
Uncharacterized protein.
   
 0.769
DCAR_010764
Uncharacterized protein.
   
 0.769
DCAR_030823
RING-type domain-containing protein.
   
 0.769
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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