STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_026033Protein kinase domain-containing protein. (702 aa)    
Predicted Functional Partners:
DCAR_011379
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.624
DCAR_026806
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.578
DCAR_002182
CYCLIN domain-containing protein; Belongs to the cyclin family.
     
 0.567
DCAR_027872
CPSF_A domain-containing protein.
    
 
 0.543
DCAR_017525
Uncharacterized protein.
    
 0.505
DCAR_017524
Uncharacterized protein; Belongs to the cyclin family.
    
 0.505
DCAR_019166
Uncharacterized protein; Belongs to the cyclin family.
    
 0.505
DCAR_015197
Uncharacterized protein; Belongs to the cyclin family.
    
 0.505
DCAR_030621
Uncharacterized protein; Belongs to the cyclin family.
    
 0.505
DCAR_027661
Uncharacterized protein; Belongs to the cyclin family.
    
 0.505
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.