STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_023049PPC domain-containing protein. (183 aa)    
Predicted Functional Partners:
DCAR_019087
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.891
DCAR_027511
PCI domain-containing protein.
   
 0.872
DCAR_001393
PCI domain-containing protein.
   
 0.867
DCAR_022816
PCI domain-containing protein.
   
 0.856
DCAR_016595
VWFA domain-containing protein.
   
 0.855
DCAR_020460
RPN13_C domain-containing protein.
   
 0.828
DCAR_030992
PCI domain-containing protein.
   
 0.767
DCAR_027444
PCI domain-containing protein.
   
 0.767
DCAR_021262
Uncharacterized protein.
   
 0.765
DCAR_009754
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.765
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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