Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_019839SBP-type domain-containing protein. (334 aa)    
Predicted Functional Partners:
DCAR_000973
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
  
 
 0.678
DCAR_001937
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.595
DCAR_018569
Uncharacterized protein.
    
 0.589
DCAR_019587
TCP domain-containing protein.
      
 0.561
DCAR_026172
Uncharacterized protein.
    
 0.550
DCAR_021588
Uncharacterized protein.
    
 0.550
DCAR_016453
PB1 domain-containing protein.
    
 0.550
DCAR_016024
Uncharacterized protein.
    
 0.550
DCAR_001727
TIP120 domain-containing protein.
     
 0.544
DCAR_006649
Uncharacterized protein.
    
 0.510
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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