STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_0168013-hydroxy-3-methylglutaryl coenzyme A reductase. (422 aa)    
Predicted Functional Partners:
DCAR_005674
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.996
DCAR_029425
Mevalonate kinase.
  
 0.981
DCAR_009859
3-hydroxy-3-methylglutaryl coenzyme A reductase.
  
  
 
0.900
DCAR_016803
Uncharacterized protein.
  
  
 
0.900
DCAR_003711
Uncharacterized protein.
   
 
 0.899
DCAR_017440
Uncharacterized protein.
  
  
 0.720
DCAR_031237
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
  
 0.720
DCAR_016090
Aminotran_1_2 domain-containing protein.
      
 0.702
DCAR_015080
Nudix hydrolase domain-containing protein.
  
  
 0.682
DCAR_022749
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
  
 0.654
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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