STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_016881Uncharacterized protein. (582 aa)    
Predicted Functional Partners:
DCAR_006229
RING-type domain-containing protein.
  
 
  0.534
DCAR_021180
START domain-containing protein.
  
 
   0.527
DCAR_029207
Uncharacterized protein.
  
    0.523
DCAR_015616
Uncharacterized protein.
  
 
   0.509
DCAR_009529
Uncharacterized protein.
  
     0.508
DCAR_025446
COBRA-like protein; Belongs to the COBRA family.
  
     0.507
DCAR_010321
START domain-containing protein.
  
 
   0.506
DCAR_021467
LOB domain-containing protein.
  
     0.503
DCAR_020409
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
  
 
  0.503
DCAR_016930
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
  0.502
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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