STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_017320rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (386 aa)    
Predicted Functional Partners:
DCAR_000230
Utp12 domain-containing protein.
   
 
 0.953
DCAR_030970
Brix domain-containing protein.
   
   0.945
DCAR_016805
Uncharacterized protein.
   
 
 0.937
DCAR_013849
Uncharacterized protein.
   
   0.937
DCAR_009531
Uncharacterized protein.
   
 
 0.937
DCAR_020803
WD_REPEATS_REGION domain-containing protein.
   
   0.926
DCAR_015254
WD_REPEATS_REGION domain-containing protein.
   
   0.926
DCAR_025365
Uncharacterized protein.
   
   0.918
DCAR_019081
Sas10 domain-containing protein.
   
   0.915
DCAR_005486
CBF domain-containing protein.
   
   0.911
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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