STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_013030Aminotran_1_2 domain-containing protein. (429 aa)    
Predicted Functional Partners:
DCAR_023045
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.982
DCAR_007568
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.981
PAL-1
Phenylalanine ammonia-lyase.
   
 
 0.959
PAL-4
Phenylalanine ammonia-lyase.
   
 
 0.959
PAL-3
Phenylalanine ammonia-lyase.
   
 
 0.959
DCAR_014910
Prephenate/arogenate dehydrogenase domain-containing protein.
    
 0.953
DCAR_003005
Aspartate aminotransferase.
   
 
 0.953
DCAR_021296
Aspartate aminotransferase.
   
 
 0.949
DCAR_012164
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
  
 
 0.944
DCAR_006147
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
  
 
 0.944
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.