STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_012772Uncharacterized protein. (304 aa)    
Predicted Functional Partners:
DCAR_017009
Uncharacterized protein.
   
 0.786
DCAR_001197
DNA_pol_B_exo1 domain-containing protein.
    
 0.653
DCAR_001198
DNA polymerase.
    
 0.653
DCAR_001814
DNA polymerase.
    
 0.646
DCAR_012839
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.
      
 0.547
DCAR_027106
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
  
 0.530
DCAR_009285
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.
   
  
 0.523
DCAR_014967
Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family.
   
  
 0.523
DCAR_024547
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
  
 0.516
DCAR_002448
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
  
 0.513
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.