STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_011290UBX domain-containing protein. (233 aa)    
Predicted Functional Partners:
DCAR_027534
UBX domain-containing protein.
    
 
 0.856
DCAR_012436
MPN domain-containing protein.
   
 
 0.750
DCAR_002634
UBX domain-containing protein.
    
 
 0.714
DCAR_030326
UBX domain-containing protein.
    
 
 0.714
DCAR_006530
UBX domain-containing protein.
    
 
 0.562
DCAR_020824
Uncharacterized protein.
    
 
 0.551
DCAR_016471
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 
 0.551
DCAR_017688
Uncharacterized protein.
    
 
 0.551
DCAR_014993
Uncharacterized protein.
    
 
 0.551
DCAR_024984
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.537
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.