STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_011568Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (460 aa)    
Predicted Functional Partners:
DCAR_004778
Uncharacterized protein.
    
 0.744
DCAR_004785
HRDC domain-containing protein.
    
 0.744
DCAR_000664
Uncharacterized protein.
   
 0.645
DCAR_026404
PPM-type phosphatase domain-containing protein.
      
 0.629
DCAR_001261
PPM-type phosphatase domain-containing protein.
      
 0.629
DCAR_011959
PPM-type phosphatase domain-containing protein.
      
 0.629
DCAR_018360
PPM-type phosphatase domain-containing protein.
      
 0.629
DCAR_012040
PPM-type phosphatase domain-containing protein.
      
 0.629
DCAR_005936
PPM-type phosphatase domain-containing protein.
      
 0.629
DCAR_007427
PPM-type phosphatase domain-containing protein.
      
 0.629
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.