STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_005856Ammonium transporter. (474 aa)    
Predicted Functional Partners:
DCAR_002917
Uncharacterized protein; Belongs to the P(II) protein family.
 
 
 0.961
DCAR_007881
Ornithine aminotransferase.
      
 0.647
DCAR_013007
Uncharacterized protein.
     
 0.502
DCAR_027142
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
  
  
 0.501
DCAR_006812
Uncharacterized protein.
      
 0.488
DCAR_018617
Uncharacterized protein.
      
 0.488
DCAR_009439
Uncharacterized protein.
      
 0.488
DCAR_008465
Uncharacterized protein.
      
 0.488
DCAR_019217
Phospho-2-dehydro-3-deoxyheptonate aldolase.
      
 0.483
DCAR_014209
Phospho-2-dehydro-3-deoxyheptonate aldolase.
      
 0.483
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.