STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_006681Uncharacterized protein. (495 aa)    
Predicted Functional Partners:
DCAR_006171
Nicalin; Belongs to the nicastrin family.
    
 
 0.966
DCAR_019862
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
    
 
 0.932
DCAR_009688
Uncharacterized protein.
    
 
 0.932
DCAR_005149
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
   
 
 0.907
DCAR_027975
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
   
 
 0.907
DCAR_015104
Uncharacterized protein.
    
   0.893
DCAR_023951
Ribosomal_L18_c domain-containing protein.
   
   0.888
DCAR_009692
Uncharacterized protein.
   
   0.880
DCAR_008693
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
    
   0.872
DCAR_023872
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
   0.860
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.