STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_007649Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. (857 aa)    
Predicted Functional Partners:
DCAR_005422
Uncharacterized protein.
    
 
 0.572
DCAR_025288
Uncharacterized protein.
    
 
 0.572
DCAR_024473
Uncharacterized protein.
    
 
 0.572
DCAR_013758
ARID domain-containing protein.
    
 
 0.572
DCAR_017610
ARID domain-containing protein.
    
 
 0.572
DCAR_026613
Uncharacterized protein.
    
 
 0.572
DCAR_026381
Uncharacterized protein.
      
 0.483
DCAR_023833
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
      
 0.457
DCAR_022578
Glutamine amidotransferase type-1 domain-containing protein; Belongs to the HisA/HisF family.
      
 0.457
DCAR_028326
Oxidored_FMN domain-containing protein.
   
  
 0.455
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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