STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_007821BBE domain-containing protein. (172 aa)    
Predicted Functional Partners:
DCAR_020613
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.485
DCAR_005486
CBF domain-containing protein.
    
  0.485
DCAR_016825
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.484
DCAR_019312
WD_REPEATS_REGION domain-containing protein.
    
  0.480
DCAR_019081
Sas10 domain-containing protein.
    
  0.479
DCAR_006466
Uncharacterized protein.
  
 
 0.476
DCAR_015239
Uncharacterized protein.
    
  0.436
DCAR_022184
Uncharacterized protein.
   
 
  0.422
DCAR_013722
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
  0.420
DCAR_013745
Uncharacterized protein.
   
  0.401
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.