Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCAR_000823 | DCAR_001331 | A0A166FWS2 | A0A161ZYN2 | Uncharacterized protein. | Uncharacterized protein. | 0.977 |
DCAR_000823 | DCAR_001836 | A0A166FWS2 | A0A166GP13 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.995 |
DCAR_000823 | DCAR_003777 | A0A166FWS2 | A0A166IH02 | Uncharacterized protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.978 |
DCAR_000823 | DCAR_011042 | A0A166FWS2 | A0A166B2Z2 | Uncharacterized protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.993 |
DCAR_000823 | DCAR_012470 | A0A166FWS2 | A0A166CFM0 | Uncharacterized protein. | RRM domain-containing protein. | 0.977 |
DCAR_000823 | DCAR_013090 | A0A166FWS2 | A0A165Z2Z2 | Uncharacterized protein. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.982 |
DCAR_000823 | DCAR_013995 | A0A166FWS2 | A0A165XXR8 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.987 |
DCAR_000823 | DCAR_021719 | A0A166FWS2 | A0A164VVE7 | Uncharacterized protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.995 |
DCAR_000823 | DCAR_024001 | A0A166FWS2 | A0A164SZI4 | Uncharacterized protein. | Brix domain-containing protein. | 0.979 |
DCAR_000823 | DCAR_026669 | A0A166FWS2 | A0A175YQK8 | Uncharacterized protein. | Uncharacterized protein. | 0.980 |
DCAR_001331 | DCAR_000823 | A0A161ZYN2 | A0A166FWS2 | Uncharacterized protein. | Uncharacterized protein. | 0.977 |
DCAR_001331 | DCAR_001836 | A0A161ZYN2 | A0A166GP13 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.985 |
DCAR_001331 | DCAR_003777 | A0A161ZYN2 | A0A166IH02 | Uncharacterized protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.994 |
DCAR_001331 | DCAR_011042 | A0A161ZYN2 | A0A166B2Z2 | Uncharacterized protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.992 |
DCAR_001331 | DCAR_013090 | A0A161ZYN2 | A0A165Z2Z2 | Uncharacterized protein. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.988 |
DCAR_001331 | DCAR_013995 | A0A161ZYN2 | A0A165XXR8 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.991 |
DCAR_001331 | DCAR_021719 | A0A161ZYN2 | A0A164VVE7 | Uncharacterized protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.991 |
DCAR_001331 | DCAR_024001 | A0A161ZYN2 | A0A164SZI4 | Uncharacterized protein. | Brix domain-containing protein. | 0.993 |
DCAR_001331 | DCAR_026669 | A0A161ZYN2 | A0A175YQK8 | Uncharacterized protein. | Uncharacterized protein. | 0.990 |
DCAR_001836 | DCAR_000823 | A0A166GP13 | A0A166FWS2 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Uncharacterized protein. | 0.995 |
page 1 of 6