STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP707b-1Abscisic acid 8'-hydroxylase 4-like; Belongs to the cytochrome P450 family. (435 aa)    
Predicted Functional Partners:
NCED-3
9-cis-epoxycarotenoid dioxygenase.
      
 0.481
DCAR_003328
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.478
DCAR_024263
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
     0.469
DCAR_009789
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
     0.460
DCAR_003327
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.455
DCAR_005253
Uncharacterized protein.
  
     0.451
DCAR_019517
Uncharacterized protein.
  
     0.449
DCAR_009214
Uncharacterized protein.
  
     0.440
DCAR_019520
Uncharacterized protein.
  
     0.427
DCAR_019022
Uncharacterized protein.
  
  
  0.410
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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