STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_002101Uncharacterized protein. (355 aa)    
Predicted Functional Partners:
DCAR_024838
Uncharacterized protein.
 
 
 0.517
DCAR_019936
TPR_REGION domain-containing protein.
   
 0.515
DCAR_016814
TPR_REGION domain-containing protein.
   
 0.515
DCAR_003715
Pex2_Pex12 domain-containing protein.
     
 0.508
DCAR_012747
Glycosyltransferase.
  
   
 0.506
DCAR_026132
Pex14_N domain-containing protein.
   
 
 0.473
DCAR_017106
Uncharacterized protein.
  
  
 0.468
DCAR_007881
Ornithine aminotransferase.
      
 0.465
DCAR_003636
Glycosyltransferase.
  
   
 0.464
DCAR_023087
Lactamase_B domain-containing protein.
   
 
 0.460
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.