STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_003734Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (504 aa)    
Predicted Functional Partners:
DCAR_021774
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
      
 0.479
DCAR_021771
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
      
 0.479
DCAR_016573
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
      
 0.479
DCAR_020818
Uncharacterized protein.
  
     0.462
DCAR_015353
Uncharacterized protein.
  
     0.436
DCAR_019668
Uncharacterized protein.
  
  
 0.429
DCAR_024433
Uncharacterized protein.
  
     0.428
DCAR_008748
Uncharacterized protein.
  
  
 0.417
DCAR_026825
Uncharacterized protein.
  
   
 0.414
DCAR_029974
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.411
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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