STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_003813Lectin_legB domain-containing protein. (469 aa)    
Predicted Functional Partners:
DCAR_022959
Uncharacterized protein.
  
 
  0.534
DCAR_026331
LEA_2 domain-containing protein.
  
 
   0.525
DCAR_016215
LEA_2 domain-containing protein.
  
 
   0.524
DCAR_018864
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
  
  
  0.513
DCAR_007567
LEA_2 domain-containing protein.
  
 
   0.510
DCAR_018863
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
  
  
  0.505
DCAR_015579
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
  
  
  0.505
DCAR_020464
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
   0.495
DCAR_020159
Uncharacterized protein.
  
  0.495
DCAR_018862
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
  
     0.492
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.