STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_0004623-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (459 aa)    
Predicted Functional Partners:
DCAR_018228
PKS_AT domain-containing protein.
 
 0.991
DCAR_007016
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.955
DCAR_026480
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.955
DCAR_019844
Uncharacterized protein.
  
 0.950
DCAR_001963
Uncharacterized protein.
  
 0.950
DCAR_016868
Uncharacterized protein.
  
 0.929
DCAR_005290
PKS_ER domain-containing protein.
   
 
 0.927
DCAR_021850
FabA domain-containing protein.
  
 
 0.898
DCAR_019427
BPL/LPL catalytic domain-containing protein.
     
 0.828
DCAR_019493
BPL/LPL catalytic domain-containing protein.
     
 0.828
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.