STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps7Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family. (155 aa)    
Predicted Functional Partners:
DCAR_024228
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.990
DCAR_001813
Uncharacterized protein.
   
 0.989
DCAR_002396
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.989
DCAR_027247
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.989
rps14
Ribosomal protein S14.
  
 0.982
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
 
 0.982
rps12
Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
 
 0.981
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
 
 0.979
DCAR_023951
Ribosomal_L18_c domain-containing protein.
  
 
 0.976
DCAR_008951
RIBOSOMAL_L9 domain-containing protein.
  
 
 0.975
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.