STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_030174Uncharacterized protein. (408 aa)    
Predicted Functional Partners:
DCAR_007786
Uncharacterized protein.
   
0.931
DCAR_024818
Uncharacterized protein.
   
0.931
DCAR_013161
Glycos_transf_1 domain-containing protein.
  
  
 
0.900
DCAR_009210
ERCC4 domain-containing protein.
    
 0.646
DCAR_029527
Phosphatidylinositol N-acetylglucosaminyltransferase subunit P; Part of the complex catalyzing the transfer of N- acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.
    
 0.565
DCAR_012855
Uncharacterized protein.
 
    
 0.556
DCAR_002883
Uncharacterized protein.
    
 0.538
DCAR_002722
Uncharacterized protein.
  
 
 0.535
DCAR_017649
Uncharacterized protein.
  
 
 0.526
DCAR_013800
Glyco_trans_4-like_N domain-containing protein.
    
 0.520
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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