Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DCAR_002842 | DCAR_003287 | A0A162AK69 | A0A166I0S2 | Uncharacterized protein. | Uncharacterized protein. | 0.598 |
DCAR_002842 | DCAR_008608 | A0A162AK69 | A0A166FGW5 | Uncharacterized protein. | Med12 domain-containing protein. | 0.534 |
DCAR_002842 | DCAR_023243 | A0A162AK69 | A0A164UUW5 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.491 |
DCAR_002842 | DCAR_026818 | A0A162AK69 | A0A175YR99 | Uncharacterized protein. | Uncharacterized protein. | 0.573 |
DCAR_002842 | DCAR_026977 | A0A162AK69 | A0A175YR54 | Uncharacterized protein. | Uncharacterized protein. | 0.719 |
DCAR_002842 | DCAR_028097 | A0A162AK69 | A0A175YMX5 | Uncharacterized protein. | Uncharacterized protein. | 0.654 |
DCAR_002842 | DCAR_030619 | A0A162AK69 | A0A175YII4 | Uncharacterized protein. | Uncharacterized protein. | 0.587 |
DCAR_002842 | MED17 | A0A162AK69 | A0A165WXT9 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.569 |
DCAR_003287 | DCAR_002842 | A0A166I0S2 | A0A162AK69 | Uncharacterized protein. | Uncharacterized protein. | 0.598 |
DCAR_003287 | DCAR_007600 | A0A166I0S2 | A0A162AWC9 | Uncharacterized protein. | Uncharacterized protein. | 0.994 |
DCAR_003287 | DCAR_008608 | A0A166I0S2 | A0A166FGW5 | Uncharacterized protein. | Med12 domain-containing protein. | 0.709 |
DCAR_003287 | DCAR_023243 | A0A166I0S2 | A0A164UUW5 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.982 |
DCAR_003287 | DCAR_026818 | A0A166I0S2 | A0A175YR99 | Uncharacterized protein. | Uncharacterized protein. | 0.652 |
DCAR_003287 | DCAR_026977 | A0A166I0S2 | A0A175YR54 | Uncharacterized protein. | Uncharacterized protein. | 0.682 |
DCAR_003287 | DCAR_028097 | A0A166I0S2 | A0A175YMX5 | Uncharacterized protein. | Uncharacterized protein. | 0.711 |
DCAR_003287 | DCAR_029576 | A0A166I0S2 | A0A175YEQ1 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.670 |
DCAR_003287 | DCAR_030619 | A0A166I0S2 | A0A175YII4 | Uncharacterized protein. | Uncharacterized protein. | 0.658 |
DCAR_003287 | MED17 | A0A166I0S2 | A0A165WXT9 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.704 |
DCAR_007600 | DCAR_003287 | A0A162AWC9 | A0A166I0S2 | Uncharacterized protein. | Uncharacterized protein. | 0.994 |
DCAR_007600 | DCAR_008608 | A0A162AWC9 | A0A166FGW5 | Uncharacterized protein. | Med12 domain-containing protein. | 0.699 |
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