STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_030351HMG box domain-containing protein. (204 aa)    
Predicted Functional Partners:
DCAR_027296
Uncharacterized protein; Belongs to the actin family.
    
 0.787
DCAR_006059
RuvB-like helicase; Belongs to the RuvB family.
    
 0.733
DCAR_027605
Uncharacterized protein.
    
 0.723
DCAR_011346
Uncharacterized protein; Belongs to the actin family.
   
 0.715
DCAR_017597
Uncharacterized protein.
    
 0.693
DCAR_017415
Uncharacterized protein.
    
 0.679
DCAR_015555
General transcription factor IIH subunit.
    
 0.637
DCAR_002738
Helicase ATP-binding domain-containing protein.
    
 0.605
DCAR_028090
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.605
DCAR_013037
Uncharacterized protein.
    
  0.551
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.