Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_028601Protein kinase domain-containing protein. (487 aa)    
Predicted Functional Partners:
DCAR_018250
WD_REPEATS_REGION domain-containing protein.
     
 0.659
DCAR_007661
UBIQUITIN_CONJUGAT_2 domain-containing protein.
      
 0.523
DCAR_018643
RING-type domain-containing protein.
      
 0.514
DCAR_014785
RHOMBOID-like protein.
      
 0.485
DCAR_027207
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.482
DCAR_011828
WD_REPEATS_REGION domain-containing protein.
   
 0.480
DCAR_020011
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.476
DCAR_031074
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
   0.471
DCAR_031034
Uncharacterized protein.
      
 0.466
DCAR_003360
Endoglucanase.
      
 0.465
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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