STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_031071PlsC domain-containing protein. (501 aa)    
Predicted Functional Partners:
DCAR_010102
Uncharacterized protein.
  
 
 0.590
DCAR_021453
Uncharacterized protein.
  
     0.515
DCAR_008354
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.495
DCAR_002503
Uncharacterized protein; Belongs to the endosulfine family.
  
     0.495
DCAR_005683
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.492
DCAR_024008
Uncharacterized protein.
  
     0.487
DCAR_001900
Uncharacterized protein.
  
     0.476
DCAR_012657
XET_C domain-containing protein.
  
     0.475
DCAR_014105
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.474
DCAR_031634
Uncharacterized protein.
  
     0.471
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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