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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_028179Uncharacterized protein. (624 aa)    
Predicted Functional Partners:
DCAR_016917
LEA_2 domain-containing protein.
  
     0.516
DCAR_012661
Uncharacterized protein.
  
     0.502
DCAR_002474
Uncharacterized protein.
  
     0.499
DCAR_016918
LEA_2 domain-containing protein.
  
     0.497
DCAR_020713
LEA_2 domain-containing protein.
  
     0.495
DCAR_020710
LEA_2 domain-containing protein.
  
     0.494
DCAR_012232
LEA_2 domain-containing protein.
  
     0.492
DCAR_030514
Uncharacterized protein.
  
     0.488
DCAR_027269
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
  
  0.476
DCAR_029204
Uncharacterized protein.
  
     0.475
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.