STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_027182Uncharacterized protein. (887 aa)    
Predicted Functional Partners:
DCAR_003883
Uncharacterized protein.
  
 
   0.510
DCAR_000614
Uncharacterized protein.
  
     0.507
DCAR_015198
Uncharacterized protein.
  
   
 0.499
DCAR_017695
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released.
    
 
 0.497
DCAR_015180
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.496
DCAR_024489
Uncharacterized protein.
  
     0.494
DCAR_019165
Uncharacterized protein.
  
   
 0.492
DCAR_013355
Uncharacterized protein.
      
 0.483
DCAR_002089
Uncharacterized protein.
      
 0.480
DCAR_014814
Reticulon-like protein.
  
     0.479
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.