STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_027770Uncharacterized protein. (2138 aa)    
Predicted Functional Partners:
DCAR_024171
Uncharacterized protein.
    
 0.801
DCAR_016188
Uncharacterized protein.
   
 0.771
DCAR_031930
TPR_REGION domain-containing protein.
    
 0.700
DCAR_024741
Uncharacterized protein.
    
 0.700
DCAR_023682
Uncharacterized protein.
  
 
 
 0.629
DCAR_006879
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.618
DCAR_003071
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.618
DCAR_026901
RING-type domain-containing protein.
  
 
 0.587
DCAR_027130
RING-type domain-containing protein.
  
 
 
 0.570
DCAR_008049
Plus3 domain-containing protein.
  
 
 0.558
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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