Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCAR_026727Protein kinase domain-containing protein. (946 aa)    
Predicted Functional Partners:
DCAR_029238
Pinin_SDK_memA domain-containing protein.
   
  0.957
DCAR_021237
TPR_REGION domain-containing protein.
  
 
 
 0.930
DCAR_024143
Uncharacterized protein.
   
  0.909
DCAR_026543
Uncharacterized protein.
   
  0.909
DCAR_006599
Uncharacterized protein.
   
 
 0.846
DCAR_014922
Tr-type G domain-containing protein.
    
 
 0.838
DCAR_025515
MPN domain-containing protein.
    
 
 0.795
DCAR_022311
MPN domain-containing protein.
    
 
 0.795
DCAR_008620
Uncharacterized protein.
    
   0.761
DCAR_005942
PWI domain-containing protein.
   
 
 0.742
Your Current Organism:
Daucus carota
NCBI taxonomy Id: 79200
Other names: D. carota subsp. sativus, Daucus carota subsp. sativus, Daucus carota subsp. sativus (Hoffm.) Arcang., Daucus carota var. sativus
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