Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atp8 | ccmB | A0A175YCW2 | I1TID2 | OrfB-F1 related. | Cytochrome c maturation protein CcmB. | 0.651 |
Atp8 | ccmC | A0A175YCW2 | I1TIB3 | OrfB-F1 related. | Putative cytochrome c biosynthesis ccmC-like mitochondrial protein; May be involved in the export of heme to the mitochondrion for the biogenesis of c-type cytochromes. Belongs to the CcmC/CycZ/HelC family. | 0.671 |
Atp8 | ccmFc | A0A175YCW2 | I1TI99 | OrfB-F1 related. | Cytochrome c biogenesis FC. | 0.633 |
Atp8 | cox2 | A0A175YCW2 | I1TIB2 | OrfB-F1 related. | Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. | 0.689 |
Atp8 | matR | A0A175YCW2 | I1TI98 | OrfB-F1 related. | Maturase. | 0.630 |
Atp8 | mttB | A0A175YCW2 | I1TIB0 | OrfB-F1 related. | MttB. | 0.698 |
Atp8 | nad1 | A0A175YCW2 | I1TIH7 | OrfB-F1 related. | NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family. | 0.671 |
Atp8 | nad4 | A0A175YCW2 | I1TIH6 | OrfB-F1 related. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.679 |
Atp8 | rps1 | A0A175YCW2 | I1TIA5 | OrfB-F1 related. | Ribosomal protein S1. | 0.659 |
ccmB | Atp8 | I1TID2 | A0A175YCW2 | Cytochrome c maturation protein CcmB. | OrfB-F1 related. | 0.651 |
ccmB | ccmC | I1TID2 | I1TIB3 | Cytochrome c maturation protein CcmB. | Putative cytochrome c biosynthesis ccmC-like mitochondrial protein; May be involved in the export of heme to the mitochondrion for the biogenesis of c-type cytochromes. Belongs to the CcmC/CycZ/HelC family. | 0.914 |
ccmB | ccmFN | I1TID2 | I1TIA1 | Cytochrome c maturation protein CcmB. | CcmFN. | 0.885 |
ccmB | ccmFc | I1TID2 | I1TI99 | Cytochrome c maturation protein CcmB. | Cytochrome c biogenesis FC. | 0.916 |
ccmB | cox2 | I1TID2 | I1TIB2 | Cytochrome c maturation protein CcmB. | Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1. | 0.763 |
ccmB | matR | I1TID2 | I1TI98 | Cytochrome c maturation protein CcmB. | Maturase. | 0.903 |
ccmB | mttB | I1TID2 | I1TIB0 | Cytochrome c maturation protein CcmB. | MttB. | 0.868 |
ccmB | nad1 | I1TID2 | I1TIH7 | Cytochrome c maturation protein CcmB. | NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family. | 0.902 |
ccmB | nad4 | I1TID2 | I1TIH6 | Cytochrome c maturation protein CcmB. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.828 |
ccmB | rps1 | I1TID2 | I1TIA5 | Cytochrome c maturation protein CcmB. | Ribosomal protein S1. | 0.650 |
ccmC | Atp8 | I1TIB3 | A0A175YCW2 | Putative cytochrome c biosynthesis ccmC-like mitochondrial protein; May be involved in the export of heme to the mitochondrion for the biogenesis of c-type cytochromes. Belongs to the CcmC/CycZ/HelC family. | OrfB-F1 related. | 0.671 |
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