STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000000021CDC42 effector protein (Rho GTPase binding) 1b. (383 aa)    
Predicted Functional Partners:
LOC105893231
Rho-related GTP-binding protein RhoG-like.
    
 0.547
LOC105905854
Rho-related GTP-binding protein RhoG-like.
    
 0.547
cdc42ep3
CDC42 effector protein 3.
     
0.525
ENSCHAP00000056274
CDC42 effector protein (Rho GTPase binding) 2.
     
0.510
ENSCHAP00000008914
annotation not available
     
 0.505
ENSCHAP00000056736
annotation not available
     
 0.505
ENSCHAP00000058963
Dedicator of cytokinesis 4b.
     
 0.505
ENSCHAP00000018026
annotation not available
    
 0.493
LOC105906845
Cell division control protein 42 homolog.
    
 0.493
ENSCHAP00000003808
annotation not available
    
 0.455
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.