STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000000159Sphingosine-1-phosphate receptor 5a. (378 aa)    
Predicted Functional Partners:
s1pr4
Sphingosine-1-phosphate receptor 4.
     
0.837
ENSCHAP00000001232
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a.
    
 0.731
GNAO1
G protein subunit alpha o1.
    
 0.731
ENSCHAP00000011502
annotation not available
    
 0.731
gnai1
G protein subunit alpha i1.
    
 0.731
LOC105897337
Guanine nucleotide-binding protein G(k) subunit alpha.
    
 0.731
ENSCHAP00000043561
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.
    
 0.731
ENSCHAP00000051344
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.
    
 0.731
S1PR3
Sphingosine 1-phosphate receptor 3-like.
  
 
0.721
LOC105899987
Guanine nucleotide-binding protein subunit alpha-13.
    
 0.720
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.