STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000000339Cytidine deaminase a. (171 aa)    
Predicted Functional Partners:
TYMP
Thymidine phosphorylase.
  
 
 0.893
ENSCHAP00000019571
Uridine phosphorylase 1.
  
 
 0.882
ENSCHAP00000060338
Uridine phosphorylase 2.
  
 
 0.882
ENSCHAP00000060350
Uridine phosphorylase 2.
  
 
 0.882
ephx2
Epoxide hydrolase 2.
    
 0.869
ENSCHAP00000041850
Thymidine kinase 1, soluble.
    
 0.844
helb
DNA helicase B.
  
 
 0.804
dera
Deoxyribose-phosphate aldolase.
  
 
 0.804
ENSCHAP00000009497
Thymidylate synthetase.
    
 0.784
LOC105895195
Inosine-uridine preferring nucleoside hydrolase-like.
   
 0.782
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.