STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105910601Apelin receptor A. (360 aa)    
Predicted Functional Partners:
gnb2
G protein subunit beta 2.
    
  0.941
ENSCHAP00000044904
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
  0.941
LOC105897337
Guanine nucleotide-binding protein G(k) subunit alpha.
    
 0.935
ENSCHAP00000023271
Apelin.
   
 
 0.933
ENSCHAP00000019715
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
    
  0.932
LOC105899196
Guanine nucleotide-binding protein subunit beta-4.
    
  0.932
GNB4
G protein subunit beta 4.
    
  0.932
ENSCHAP00000048597
annotation not available
    
 
 0.928
ENSCHAP00000005464
Guanine nucleotide binding protein (G protein), beta 5b.
    
  0.921
LOC105892356
Guanine nucleotide-binding protein subunit beta-5.
    
  0.921
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.