STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pigoPhosphatidylinositol glycan anchor biosynthesis class O. (1088 aa)    
Predicted Functional Partners:
pigk
Phosphatidylinositol glycan anchor biosynthesis class K.
    
 0.947
pigu
Phosphatidylinositol glycan anchor biosynthesis class U.
   
 0.945
ENSCHAP00000049655
Phosphatidylinositol glycan anchor biosynthesis, class F.
    
 0.943
pigs
Phosphatidylinositol glycan anchor biosynthesis class S.
   
 0.940
ENSCHAP00000039971
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.937
pigt
Phosphatidylinositol glycan anchor biosynthesis class T.
    
 0.934
ENSCHAP00000039826
Phosphatidylinositol glycan anchor biosynthesis, class B.
     
 0.932
kdsr
3-ketodihydrosphingosine reductase.
     
 0.871
coasy
Coenzyme A synthase.
    
 0.856
pigv
Phosphatidylinositol glycan anchor biosynthesis class V.
   
 0.813
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.