STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ergic3ERGIC and golgi 3. (385 aa)    
Predicted Functional Partners:
ENSCHAP00000012434
GTP binding protein 3, mitochondrial.
  
 0.992
ENSCHAP00000027704
annotation not available
   
 
  0.909
ccdc47
Coiled-coil domain containing 47.
   
 
  0.905
vps45
Vacuolar protein sorting 45 homolog.
 
      0.900
ENSCHAP00000022671
Mediator complex subunit 24.
    
  0.873
LOC105913440
G2 and S phase-expressed protein 1-like.
  
 0.846
ENSCHAP00000037798
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
 0.846
ENSCHAP00000012977
Pyrroline-5-carboxylate reductase 1a.
    
  0.788
ENSCHAP00000034046
Pyrroline-5-carboxylate reductase 3.
    
  0.788
rpl9
Ribosomal protein L9.
  
 
 0.784
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.