gpr78 protein (Clupea harengus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

gpr78

G protein-coupled receptor 78. (339 aa)

Predicted Functional Partners:

ENSCHAP00000055455

0.485

ENSCHAP00000005677

0.480

ENSCHAP00000007027

0.478

ENSCHAP00000048484

0.466

ENSCHAP00000060831

0.466

ENSCHAP00000046846

0.445

ENSCHAP00000037565

0.433

gnas

0.433

LOC105904870

0.405

ENSCHAP00000018535

0.405

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHAP00000005677	gpr78	ENSCHAP00000005677	ENSCHAP00000000800	Prepronociceptin a.	G protein-coupled receptor 78.	0.480
ENSCHAP00000007027	ENSCHAP00000046846	ENSCHAP00000007027	ENSCHAP00000046846	annotation not available	annotation not available	0.997
ENSCHAP00000007027	ENSCHAP00000048484	ENSCHAP00000007027	ENSCHAP00000048484	annotation not available	HAUS augmin-like complex, subunit 3.	0.991
ENSCHAP00000007027	ENSCHAP00000060831	ENSCHAP00000007027	ENSCHAP00000060831	annotation not available	annotation not available	0.991
ENSCHAP00000007027	gpr78	ENSCHAP00000007027	ENSCHAP00000000800	annotation not available	G protein-coupled receptor 78.	0.478
ENSCHAP00000018535	LOC105904870	ENSCHAP00000018535	ENSCHAP00000014418	Arrestin, beta 1.	Arrestin red cell isoform 1-like.	0.819
ENSCHAP00000018535	gpr78	ENSCHAP00000018535	ENSCHAP00000000800	Arrestin, beta 1.	G protein-coupled receptor 78.	0.405
ENSCHAP00000037565	gnas	ENSCHAP00000037565	ENSCHAP00000059563	annotation not available	GNAS complex locus.	0.851
ENSCHAP00000037565	gpr78	ENSCHAP00000037565	ENSCHAP00000000800	annotation not available	G protein-coupled receptor 78.	0.433
ENSCHAP00000046846	ENSCHAP00000007027	ENSCHAP00000046846	ENSCHAP00000007027	annotation not available	annotation not available	0.997
ENSCHAP00000046846	ENSCHAP00000048484	ENSCHAP00000046846	ENSCHAP00000048484	annotation not available	HAUS augmin-like complex, subunit 3.	0.995
ENSCHAP00000046846	ENSCHAP00000060831	ENSCHAP00000046846	ENSCHAP00000060831	annotation not available	annotation not available	0.995
ENSCHAP00000046846	gpr78	ENSCHAP00000046846	ENSCHAP00000000800	annotation not available	G protein-coupled receptor 78.	0.445
ENSCHAP00000048484	ENSCHAP00000007027	ENSCHAP00000048484	ENSCHAP00000007027	HAUS augmin-like complex, subunit 3.	annotation not available	0.991
ENSCHAP00000048484	ENSCHAP00000046846	ENSCHAP00000048484	ENSCHAP00000046846	HAUS augmin-like complex, subunit 3.	annotation not available	0.995
ENSCHAP00000048484	gpr78	ENSCHAP00000048484	ENSCHAP00000000800	HAUS augmin-like complex, subunit 3.	G protein-coupled receptor 78.	0.466
ENSCHAP00000055455	gpr78	ENSCHAP00000055455	ENSCHAP00000000800	annotation not available	G protein-coupled receptor 78.	0.485
ENSCHAP00000060831	ENSCHAP00000007027	ENSCHAP00000060831	ENSCHAP00000007027	annotation not available	annotation not available	0.991
ENSCHAP00000060831	ENSCHAP00000046846	ENSCHAP00000060831	ENSCHAP00000046846	annotation not available	annotation not available	0.995
ENSCHAP00000060831	gpr78	ENSCHAP00000060831	ENSCHAP00000000800	annotation not available	G protein-coupled receptor 78.	0.466